|
| Status |
Public on Feb 02, 2015 |
| Title |
CTR_KA_rep.2 |
| Sample type |
RNA |
| |
|
| Source name |
denate gyrus of hippocampus
|
| Organism |
Mus musculus |
| Characteristics |
time: 6 hrs
drug: Kainic acid
genotype: CTR (SRF f/f)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with QIAGEN RNeasy mini kit followed by clean-up and DNase I treatment in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays.
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol.
|
| Scan protocol |
Standard Illumina scanning protocol.
|
| Data processing |
The data were preprocessed using beadarray R package and normalized using quantile normalization.
|
| |
|
| Submission date |
Aug 26, 2014 |
| Last update date |
Feb 02, 2015 |
| Contact name |
Marcin Piechota |
| E-mail(s) |
[email protected]
|
| Phone |
(+4812) 6623328
|
| Organization name |
Institute of Pharmacology PAS
|
| Department |
Molecular Neuropharmacology
|
| Street address |
Smetna 12
|
| City |
Krakow |
| ZIP/Postal code |
31-343 |
| Country |
Poland |
| |
|
| Platform ID |
GPL17543 |
| Series (1) |
| GSE60772 |
Genome-wide analysis of kainic acid-induced gene expression in dentate gyrus from CTR and SRF knockout mice. |
|
