|
| Status |
Public on Aug 26, 2014 |
| Title |
lesional_skin_case4_(2 reps) |
| Sample type |
RNA |
| |
|
| Source name |
epidermal shave
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: lesional skin
phenotype: Atopic Dermatitis
gender: m
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with the PAXgene Tissue RNA Kit (Qiagen)
|
| Label |
biotin
|
| Label protocol |
In vitro transcription into cRNA and biotin-UTP labeling were performed using the Illumina TotalPrep-96 RNA Amplification Kit (Ambion, Life Technologies, Carlsbad, CA)
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol.
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
Sample_6, Sample_36
|
| Data processing |
The data were normalised using quantile normalisation with IlluminaGUI in R
|
| |
|
| Submission date |
Aug 25, 2014 |
| Last update date |
Mar 22, 2017 |
| Contact name |
Hansjoerg Baurecht |
| E-mail(s) |
[email protected]
|
| Organization name |
University Hospital Schleswig-Holstein, Campus Kiel
|
| Department |
Department of Dermatology, Venereology and Allergology
|
| Street address |
Schittenhelmstr. 7
|
| City |
Kiel |
| ZIP/Postal code |
24103 |
| Country |
Germany |
| |
|
| Platform ID |
GPL6947 |
| Series (1) |
| GSE60709 |
Transcription profiling by array of epidermal shave samples taken from lesional and non-lesional skin from German atopic dermatitis patients and from healthy skin from German controls |
|
| Relations |
| Reanalyzed by |
GSE65314 |
