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Sample GSM148457 Query DataSets for GSM148457
Status Public on Feb 22, 2007
Title IMR-32_pCMV-SQSTM1_48hr_rep 1
Sample type RNA
 
Source name IMR-32_pCMV-SQSTM1_48hr
Organism Homo sapiens
Characteristics IMR-32_pCMV-SQSTM1_48hr
Extracted molecule total RNA
Extraction protocol Human neuroblastoma cells IMR-32 (ATCC) were grown in DMEM medium supplemented with 10% FBS and treated as described above. RNA was isolated using the RNeasy Kit from Qiagen.
Label biotin
Label protocol cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
 
Hybridization protocol standard Affymetrix procedures using the GeneChip Fluidics Station 450
Scan protocol standard Affymetrix procedures using the GeneChip 3000 scanner
Description IMR-32_pCMV-SQSTM1_48hr
Data processing gcRMA
 
Submission date Dec 05, 2006
Last update date Aug 28, 2018
Contact name John R Walker
E-mail(s) [email protected]
Phone 858-812-1636
Organization name Genomics Institute of the Novartis Research Foundation
Lab Genetics Core
Street address 10675 John Jay Hopkins
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL570
Series (1)
GSE6451 A genomic screen for activators of the antioxidant response element
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript

Data table
ID_REF VALUE
1007_s_at 3419.3
1053_at 9169.2
117_at 96.4
121_at 72.4
1255_g_at 74
1294_at 93.9
1316_at 95.1
1320_at 134.9
1405_i_at 108.3
1431_at 75.8
1438_at 154.9
1487_at 945.1
1494_f_at 66.3
1552256_a_at 11527.2
1552257_a_at 7166.2
1552258_at 69.1
1552261_at 78.3
1552263_at 88
1552264_a_at 3607.8
1552266_at 94.5

Total number of rows: 54675

Table truncated, full table size 879 Kbytes.




Supplementary file Size Download File type/resource
GSM148457.CEL.gz 8.2 Mb (ftp)(http) CEL
GSM148457.EXP.gz 514 b (ftp)(http) EXP

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