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Sample GSM1402908 Query DataSets for GSM1402908
Status Public on Jun 04, 2014
Title shEbf1 Hairpin 1_repeat3
Sample type RNA
 
Source name shEbf1 Hairpin 1
Organism Mus musculus
Characteristics cell type: 3T3L1
lentivirus: shEbf1 Hairpin 1
Treatment protocol Mature 3T3-L1 cells were subjected to 3-4 serial infections with virus, and selected with 5 μg/ml puromycin for at least 8 days prior to harvest.
Extracted molecule total RNA
Extraction protocol amplification with the NuGEN Ovation WTA Pico kit
Label biotin
Label protocol labeling with Encore Biotin Module.
 
Hybridization protocol As manufacturer's instruction
Scan protocol As manufacturer's instruction
Description shEbf1 Hairpin 1
Data processing RMA procedure in BioConductor package for summarization and normalization
 
Submission date Jun 03, 2014
Last update date Jun 04, 2014
Contact name Evan Rosen
E-mail(s) [email protected]
Organization name Beth Israel Deconess Medical Center
Department Endocrinology
Lab Rosen Lab
Street address 3 Blackfan Cir
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE58193 Characterizing the profiles of Ebf1 in mouse fat cells.

Data table header descriptions
ID_REF
VALUE RMA normalized signals

Data table
ID_REF VALUE
1415670_at 11.11182993
1415671_at 13.59652733
1415672_at 12.8311776
1415673_at 11.26037394
1415674_a_at 11.04233756
1415675_at 11.38123624
1415676_a_at 12.57142902
1415677_at 10.53670945
1415678_at 12.40643061
1415679_at 12.39299227
1415680_at 10.9106496
1415681_at 12.08179865
1415682_at 7.728151306
1415683_at 12.9668809
1415684_at 9.283785629
1415685_at 10.38907918
1415686_at 11.29962815
1415687_a_at 13.88402324
1415688_at 11.38883151
1415689_s_at 11.30783848

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM1402908_HURLS_p_Griffin_Affy_Redo_Mouse430_2_A06_1037664.CEL.gz 3.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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