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Sample GSM139638 Query DataSets for GSM139638
Status Public on Dec 19, 2008
Title HB101
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.36379507809605
117_3p_at 7.67187881440413
1494_3p_f_at 7.61747207336926
1552275_3p_s_at 7.72009936154833
1552281_3p_at 9.2565135579529
1552296_3p_at 5.94883426212041
1552302_3p_at 6.02331056380119
1552311_3p_a_at 8.39437152837
1552321_3p_a_at 4.86031341379638
1552340_3p_at 6.64507719137146
1552343_3p_s_at 6.81721773600899
1552354_3p_at 7.55143974172808
1552476_3p_s_at 7.65301346721752
1552480_3p_s_at 3.58388040263551
1552504_3p_a_at 7.63988151612952
1552518_3p_s_at 5.65032733359865
1552528_3p_at 8.16690224539218
1552535_3p_at 7.8400693780551
1552566_3p_at 6.51517665825883
1552575_3p_a_at 8.9923037396964

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139638.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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