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Sample GSM139637 Query DataSets for GSM139637
Status Public on Dec 19, 2008
Title HB100
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T-
Node: N-
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.27806768736976
117_3p_at 7.63101428105122
1494_3p_f_at 7.4481341211907
1552275_3p_s_at 8.14605144306501
1552281_3p_at 9.2131223392673
1552296_3p_at 5.69178305837091
1552302_3p_at 5.97967846004998
1552311_3p_a_at 8.23910783684435
1552321_3p_a_at 4.61218734704083
1552340_3p_at 6.4676362334563
1552343_3p_s_at 7.47683924877193
1552354_3p_at 7.20616153958082
1552476_3p_s_at 7.52616112465665
1552480_3p_s_at 3.55200627912923
1552504_3p_a_at 7.31388549525734
1552518_3p_s_at 5.95801305965171
1552528_3p_at 8.274620988295
1552535_3p_at 7.93848014464493
1552566_3p_at 6.49616387525245
1552575_3p_a_at 8.59046329976873

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139637.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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