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Sample GSM139630 Query DataSets for GSM139630
Status Public on Dec 19, 2008
Title HB93
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 7.76485665825912
117_3p_at 7.82533846674128
1494_3p_f_at 7.44520390783866
1552275_3p_s_at 7.9984159334241
1552281_3p_at 9.25376804604667
1552296_3p_at 6.11333700503952
1552302_3p_at 6.24183976403016
1552311_3p_a_at 8.56791794350655
1552321_3p_a_at 5.11003908666056
1552340_3p_at 6.6985831300749
1552343_3p_s_at 6.71546081261916
1552354_3p_at 7.45354520240133
1552476_3p_s_at 7.93780168352282
1552480_3p_s_at 3.8807637482955
1552504_3p_a_at 7.7791203013175
1552518_3p_s_at 5.8508216426996
1552528_3p_at 7.93317954009213
1552535_3p_at 7.84246989062108
1552566_3p_at 6.4155818363474
1552575_3p_a_at 8.76122808730946

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139630.cel.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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