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Sample GSM139628 Query DataSets for GSM139628
Status Public on Dec 19, 2008
Title HB91
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N2
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.47899217081826
117_3p_at 7.85023219957658
1494_3p_f_at 7.38130477471384
1552275_3p_s_at 7.31427810300917
1552281_3p_at 9.2088187444152
1552296_3p_at 5.90536991320789
1552302_3p_at 6.1843836205334
1552311_3p_a_at 8.4726377314431
1552321_3p_a_at 4.50144472095359
1552340_3p_at 6.74637922019367
1552343_3p_s_at 6.55376272319115
1552354_3p_at 7.61379044549063
1552476_3p_s_at 7.46068158618843
1552480_3p_s_at 3.64693543222794
1552504_3p_a_at 7.53052605889145
1552518_3p_s_at 6.26805362119939
1552528_3p_at 8.1189360106646
1552535_3p_at 7.99992766130888
1552566_3p_at 6.32642623158636
1552575_3p_a_at 8.16570117528079

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139628.cel.gz 9.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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