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Sample GSM139621 Query DataSets for GSM139621
Status Public on Dec 19, 2008
Title HB84
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.4321412599425
117_3p_at 7.35860442450581
1494_3p_f_at 7.53535327783485
1552275_3p_s_at 7.78519451261661
1552281_3p_at 9.18183819677339
1552296_3p_at 5.66411465751794
1552302_3p_at 6.09420036263174
1552311_3p_a_at 8.0911316560464
1552321_3p_a_at 4.76034790364337
1552340_3p_at 6.65813255860335
1552343_3p_s_at 7.00739022354561
1552354_3p_at 7.34578956638581
1552476_3p_s_at 7.73881920756945
1552480_3p_s_at 3.81244957609299
1552504_3p_a_at 7.31794721558595
1552518_3p_s_at 5.58594538111351
1552528_3p_at 8.36252573398935
1552535_3p_at 7.96386931324867
1552566_3p_at 6.44379994340174
1552575_3p_a_at 7.56491579153152

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139621.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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