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Sample GSM139619 Query DataSets for GSM139619
Status Public on Dec 19, 2008
Title HB82
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.04408327156419
117_3p_at 7.79695236082522
1494_3p_f_at 7.4483162676122
1552275_3p_s_at 8.10637605571362
1552281_3p_at 9.12377498265818
1552296_3p_at 5.86972471038272
1552302_3p_at 6.05925378657725
1552311_3p_a_at 8.43546300702462
1552321_3p_a_at 5.22526957127646
1552340_3p_at 6.7256016222686
1552343_3p_s_at 7.25246867329205
1552354_3p_at 7.80173112394313
1552476_3p_s_at 7.51629906111014
1552480_3p_s_at 4.37133606145928
1552504_3p_a_at 7.5808452957092
1552518_3p_s_at 5.71443353237676
1552528_3p_at 8.1019252394087
1552535_3p_at 7.92176332154088
1552566_3p_at 6.21858498109187
1552575_3p_a_at 8.00244109752919

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139619.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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