NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM139618 Query DataSets for GSM139618
Status Public on Dec 19, 2008
Title HB81
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.5470659381608
117_3p_at 7.81583037854275
1494_3p_f_at 7.55700142045683
1552275_3p_s_at 7.82451169590481
1552281_3p_at 9.37640386787272
1552296_3p_at 5.95643036636032
1552302_3p_at 5.80506054956288
1552311_3p_a_at 8.47294262505978
1552321_3p_a_at 4.71755993103297
1552340_3p_at 6.83534608515743
1552343_3p_s_at 7.27115659265569
1552354_3p_at 7.36770525432436
1552476_3p_s_at 7.43817488667084
1552480_3p_s_at 3.51078506950249
1552504_3p_a_at 7.68501318380571
1552518_3p_s_at 5.59836378221313
1552528_3p_at 8.22509712272769
1552535_3p_at 7.95198783794956
1552566_3p_at 6.47277041348799
1552575_3p_a_at 7.45733484972647

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139618.cel.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap