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Sample GSM139617 Query DataSets for GSM139617
Status Public on Dec 19, 2008
Title HB80
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.27144562952503
117_3p_at 7.63610319142432
1494_3p_f_at 7.37365736111587
1552275_3p_s_at 7.80132446973509
1552281_3p_at 9.23484023708329
1552296_3p_at 5.81743851632648
1552302_3p_at 6.06259030569521
1552311_3p_a_at 8.29097980838089
1552321_3p_a_at 4.82542153799086
1552340_3p_at 6.58230709290876
1552343_3p_s_at 7.3099730555495
1552354_3p_at 7.36339635832493
1552476_3p_s_at 7.57617266542137
1552480_3p_s_at 4.56656400429095
1552504_3p_a_at 7.59263656015968
1552518_3p_s_at 5.7522860282882
1552528_3p_at 8.08027758253107
1552535_3p_at 7.85120267638587
1552566_3p_at 6.45362755425007
1552575_3p_a_at 8.06214751699213

Total number of rows: 61297

Table truncated, full table size 2187 Kbytes.




Supplementary file Size Download File type/resource
gsm139617.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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