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Sample GSM139611 Query DataSets for GSM139611
Status Public on Dec 19, 2008
Title HB74
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.06159807831931
117_3p_at 8.06678238246308
1494_3p_f_at 7.68317739159342
1552275_3p_s_at 7.63219469992449
1552281_3p_at 9.21102105357102
1552296_3p_at 6.0750546908446
1552302_3p_at 5.98758751558867
1552311_3p_a_at 8.42353574724523
1552321_3p_a_at 4.67803230891027
1552340_3p_at 6.87969009087792
1552343_3p_s_at 6.85297325315075
1552354_3p_at 7.67083042670064
1552476_3p_s_at 7.80630909167571
1552480_3p_s_at 3.8038849594245
1552504_3p_a_at 7.99072678249679
1552518_3p_s_at 6.34519004128277
1552528_3p_at 8.15235918724903
1552535_3p_at 8.11003381468127
1552566_3p_at 6.25621158533915
1552575_3p_a_at 8.31121835531738

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139611.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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