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Sample GSM139604 Query DataSets for GSM139604
Status Public on Dec 19, 2008
Title HB67
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.7706361151482
117_3p_at 7.39254862323035
1494_3p_f_at 7.32359376181453
1552275_3p_s_at 7.53045608942355
1552281_3p_at 9.25344359377854
1552296_3p_at 5.7569179778938
1552302_3p_at 5.09724997296827
1552311_3p_a_at 8.26715951306342
1552321_3p_a_at 4.3344060813205
1552340_3p_at 6.50672611547417
1552343_3p_s_at 7.54624908656077
1552354_3p_at 7.56081083765808
1552476_3p_s_at 7.61568662967488
1552480_3p_s_at 3.38871107646401
1552504_3p_a_at 7.58300284446386
1552518_3p_s_at 5.58974065949224
1552528_3p_at 8.1735208644408
1552535_3p_at 7.90405014749954
1552566_3p_at 6.67836701258411
1552575_3p_a_at 8.10517480458479

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139604.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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