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Sample GSM139597 Query DataSets for GSM139597
Status Public on Dec 19, 2008
Title HB60
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.69750474947856
117_3p_at 7.66614987163487
1494_3p_f_at 7.21317319637779
1552275_3p_s_at 8.01665622768444
1552281_3p_at 9.20664786453336
1552296_3p_at 5.90708812829455
1552302_3p_at 5.29990011802314
1552311_3p_a_at 7.95663583747844
1552321_3p_a_at 4.5052667612802
1552340_3p_at 6.6757859198816
1552343_3p_s_at 7.82887733048682
1552354_3p_at 6.98916127980092
1552476_3p_s_at 7.38048082738682
1552480_3p_s_at 3.79323880916217
1552504_3p_a_at 7.52736837633391
1552518_3p_s_at 5.27903423560244
1552528_3p_at 8.21559944909485
1552535_3p_at 8.0008746162321
1552566_3p_at 6.72699100986562
1552575_3p_a_at 7.55983261498717

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139597.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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