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Sample GSM139591 Query DataSets for GSM139591
Status Public on Dec 19, 2008
Title HB54
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N2
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.2898434177105
117_3p_at 7.5601250137937
1494_3p_f_at 7.54284169771709
1552275_3p_s_at 8.05646739205778
1552281_3p_at 9.31601274567803
1552296_3p_at 6.43178839127727
1552302_3p_at 6.65868975669962
1552311_3p_a_at 8.10431166015255
1552321_3p_a_at 5.00196342234886
1552340_3p_at 6.58230709290876
1552343_3p_s_at 7.59340906478602
1552354_3p_at 6.88521628614609
1552476_3p_s_at 7.75115585293345
1552480_3p_s_at 3.58642930317328
1552504_3p_a_at 7.49181625307039
1552518_3p_s_at 5.75569244407547
1552528_3p_at 8.52089925854978
1552535_3p_at 7.95988026134422
1552566_3p_at 6.49825114712598
1552575_3p_a_at 7.4049286462368

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139591.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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