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Sample GSM139580 Query DataSets for GSM139580
Status Public on Dec 19, 2008
Title HB43
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.4839772658129
117_3p_at 7.88423837521375
1494_3p_f_at 7.5253118538195
1552275_3p_s_at 7.72345482339984
1552281_3p_at 9.1322410409294
1552296_3p_at 6.01455983410037
1552302_3p_at 5.6310548426708
1552311_3p_a_at 8.1873434630677
1552321_3p_a_at 4.90760241532747
1552340_3p_at 6.72524701458682
1552343_3p_s_at 7.08776171939598
1552354_3p_at 7.83944587049036
1552476_3p_s_at 7.96673998266847
1552480_3p_s_at 3.31808502553251
1552504_3p_a_at 7.8321823431029
1552518_3p_s_at 5.60452594612657
1552528_3p_at 8.17786661412325
1552535_3p_at 8.00664357687135
1552566_3p_at 6.73850159780729
1552575_3p_a_at 7.36755726110796

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139580.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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