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Sample GSM139575 Query DataSets for GSM139575
Status Public on Dec 19, 2008
Title HB38
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.15559980613678
117_3p_at 7.4231233098771
1494_3p_f_at 7.52102194546032
1552275_3p_s_at 7.33441511623383
1552281_3p_at 9.05526026584951
1552296_3p_at 5.63887619393017
1552302_3p_at 6.12561092730199
1552311_3p_a_at 8.28030580733012
1552321_3p_a_at 4.5363983445708
1552340_3p_at 6.52377063837208
1552343_3p_s_at 7.07016212386617
1552354_3p_at 7.55824815597186
1552476_3p_s_at 7.6437272981759
1552480_3p_s_at 3.34826317674577
1552504_3p_a_at 7.60364211972836
1552518_3p_s_at 5.27501874632703
1552528_3p_at 8.10166430823984
1552535_3p_at 7.86766180304807
1552566_3p_at 6.36783605685319
1552575_3p_a_at 8.1080080104338

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139575.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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