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Sample GSM139566 Query DataSets for GSM139566
Status Public on Dec 19, 2008
Title HB29
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.02993783914469
117_3p_at 7.75279530908622
1494_3p_f_at 7.60895014913959
1552275_3p_s_at 7.71493173922578
1552281_3p_at 9.11477647974361
1552296_3p_at 5.84585301636307
1552302_3p_at 5.96549106586993
1552311_3p_a_at 8.50760530462435
1552321_3p_a_at 4.92636270233296
1552340_3p_at 6.82694909137212
1552343_3p_s_at 6.976994396402
1552354_3p_at 7.43246182050679
1552476_3p_s_at 7.52207641075926
1552480_3p_s_at 3.73286533897548
1552504_3p_a_at 7.87989761920641
1552518_3p_s_at 5.8753299557285
1552528_3p_at 8.41275682364902
1552535_3p_at 7.97841089388308
1552566_3p_at 6.63493123371577
1552575_3p_a_at 7.76469458816375

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139566.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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