NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM139564 Query DataSets for GSM139564
Status Public on Dec 19, 2008
Title HB27
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.70472670019658
117_3p_at 7.7475986466403
1494_3p_f_at 7.55567137898481
1552275_3p_s_at 7.54270963759837
1552281_3p_at 9.18991307177885
1552296_3p_at 5.8082222534439
1552302_3p_at 6.16691808230721
1552311_3p_a_at 8.42848292537781
1552321_3p_a_at 5.02625673264698
1552340_3p_at 6.65375883747088
1552343_3p_s_at 7.770931038962
1552354_3p_at 7.45190999645208
1552476_3p_s_at 7.56898223875732
1552480_3p_s_at 3.44704068611499
1552504_3p_a_at 7.81244284074609
1552518_3p_s_at 6.32418052924537
1552528_3p_at 8.27508939794828
1552535_3p_at 8.09525723395423
1552566_3p_at 6.6399459954492
1552575_3p_a_at 7.60276009259015

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139564.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap