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Sample GSM139563 Query DataSets for GSM139563
Status Public on Dec 19, 2008
Title HB26
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.13670568866908
117_3p_at 7.96331189073605
1494_3p_f_at 7.41879335148006
1552275_3p_s_at 7.81930351500122
1552281_3p_at 9.37909408569684
1552296_3p_at 6.04681837702185
1552302_3p_at 6.27329738363097
1552311_3p_a_at 8.44928265319598
1552321_3p_a_at 4.5385134600462
1552340_3p_at 6.89625807462964
1552343_3p_s_at 7.69506938713866
1552354_3p_at 7.1352487721592
1552476_3p_s_at 7.23237010720722
1552480_3p_s_at 4.39612855159081
1552504_3p_a_at 7.51619035032697
1552518_3p_s_at 5.90528054483022
1552528_3p_at 8.3016156095625
1552535_3p_at 7.94553113944173
1552566_3p_at 6.57846439760978
1552575_3p_a_at 7.14067366021533

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139563.cel.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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