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Sample GSM139550 Query DataSets for GSM139550
Status Public on Dec 19, 2008
Title HB13
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.83139970621847
117_3p_at 7.89887847572113
1494_3p_f_at 7.60165647286483
1552275_3p_s_at 7.24070621578637
1552281_3p_at 9.56485651241547
1552296_3p_at 5.91815430594083
1552302_3p_at 6.30572480252653
1552311_3p_a_at 8.27405122205398
1552321_3p_a_at 4.60301913345737
1552340_3p_at 7.05996687013022
1552343_3p_s_at 6.79668733600554
1552354_3p_at 7.39468494466834
1552476_3p_s_at 7.64303610120067
1552480_3p_s_at 3.36362684826947
1552504_3p_a_at 8.0558482483978
1552518_3p_s_at 5.59533228161457
1552528_3p_at 8.22427616569002
1552535_3p_at 7.97590494619113
1552566_3p_at 6.81688057762394
1552575_3p_a_at 7.59838268159002

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139550.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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