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Sample GSM139541 Query DataSets for GSM139541
Status Public on Dec 19, 2008
Title HB04
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.65782495029473
117_3p_at 7.75971361623457
1494_3p_f_at 7.56172602104885
1552275_3p_s_at 8.10683128082594
1552281_3p_at 9.1477701656765
1552296_3p_at 5.76165155329457
1552302_3p_at 6.10957029053459
1552311_3p_a_at 8.27910217956333
1552321_3p_a_at 5.01718727051396
1552340_3p_at 6.50713370564132
1552343_3p_s_at 7.00050317199249
1552354_3p_at 7.57877523963801
1552476_3p_s_at 7.84963549458559
1552480_3p_s_at 3.66289326066289
1552504_3p_a_at 7.62525011047467
1552518_3p_s_at 5.36836956076015
1552528_3p_at 8.05647658234661
1552535_3p_at 7.7433496146796
1552566_3p_at 6.36178816122472
1552575_3p_a_at 7.81473335251335

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139541.cel.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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