NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM139539 Query DataSets for GSM139539
Status Public on Dec 19, 2008
Title HB02
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) [email protected]
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 10.0964009782572
117_3p_at 8.08341209899132
1494_3p_f_at 7.6303339518497
1552275_3p_s_at 7.66680216697829
1552281_3p_at 9.28527691736549
1552296_3p_at 5.67946064043292
1552302_3p_at 5.81135989549804
1552311_3p_a_at 8.27140014205528
1552321_3p_a_at 4.83241451401688
1552340_3p_at 6.77121763392635
1552343_3p_s_at 7.02640289179742
1552354_3p_at 6.93438175341477
1552476_3p_s_at 7.56741292609922
1552480_3p_s_at 3.75256156224559
1552504_3p_a_at 7.61457479450492
1552518_3p_s_at 5.1205721061321
1552528_3p_at 8.56572432578466
1552535_3p_at 8.0202003324897
1552566_3p_at 6.85490349932936
1552575_3p_a_at 8.5279049498043

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139539.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap