NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1359095 Query DataSets for GSM1359095
Status Public on Jun 01, 2014
Title kidney tumor #1
Sample type RNA
 
Source name kidney tumor #1
Organism Mus musculus
Characteristics tissue: kidney
tumor status: tumorous
age: 5W
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol biotin
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Lin28 derived Wilms tumor biological replicate #1
Data processing The data were normalised using the average background subtracted method
 
Submission date Mar 28, 2014
Last update date Jun 01, 2014
Contact name Achia Urbach
E-mail(s) [email protected]
Phone 617-919-2012
Organization name Children's hospital
Department Hema/Onc
Lab George daley
Street address 1 Blakfan circle
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL6885
Series (1)
GSE56323 Lin28 sustains early renal progenitors and induces Wilms tumor

Data table header descriptions
ID_REF
VALUE normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 20.3 0.03133
ILMN_2707227 1432.3 0
ILMN_2896528 2499.4 0
ILMN_2721178 675.2 0
ILMN_1227723 349.8 0
ILMN_3033922 877.1 0
ILMN_3092673 2838.3 0
ILMN_2730714 3732.1 0
ILMN_3162224 669.8 0
ILMN_2816356 24.7 0.01754
ILMN_2808939 713.4 0
ILMN_2634564 266.6 0
ILMN_1216623 168.8 0
ILMN_1215157 550.7 0
ILMN_1228777 8.5 0.18045
ILMN_2737647 -3.2 0.62155
ILMN_1216425 107.3 0
ILMN_2734484 275.4 0
ILMN_2652961 6 0.26441
ILMN_2952292 50.9 0

Total number of rows: 25697

Table truncated, full table size 593 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap