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GEO accession:
Sample GSM135551
Query DataSets for GSM135551
Status
Public on Sep 10, 2007
Title
syd-2_rep1
Sample type
RNA
Source name
10 day old syd-2 seedlings
Organism
Arabidopsis thaliana
Characteristics
Age: 10 day old seedlings
Genotype: syd-2
Extracted molecule
total RNA
Label
biotin
Description
10 day old syd-2 seedlings grown at 22 degrees Celsius in 16 hrs cool white light (120 µmol/m2sec)
Data processing
MAS 5.0 algorithm implemented in Bioconductor using the Affy package
Submission date
Sep 10, 2006
Last update date
Aug 28, 2018
Contact name
Doris Wagner
E-mail(s)
[email protected]
Phone
215-898-0483
Organization name
University of Pennsylvania
Department
Biology
Street address
City
Philadelphia
State/province
PA
ZIP/Postal code
19104
Country
USA
Platform ID
GPL198
Series (1)
GSE5806
Identification of differentially expressed genes in brm-101 and syd-2 mutants
Relations
Reanalyzed by
GSE119083
Data table header descriptions
ID_REF
VALUE
Signal intensity
ABS_CALL
Detection call
DETECTION P-VALUE
Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
244901_at
50.40357826
A
0.296855833
244902_at
54.91438622
A
0.164032396
244903_at
207.0433467
P
0.003822926
244904_at
121.5483367
P
0.020429855
244905_at
23.24881529
A
0.761546785
244906_at
68.92697975
A
0.123873163
244907_at
1.38364197
A
0.979570145
244908_at
1.487195393
A
0.99778039
244909_at
5.117356783
A
0.962315928
244910_s_at
46.57689975
A
0.73315269
244911_at
6.585268577
A
0.922570036
244912_at
1289.425639
P
0.002923594
244913_at
7.246663061
A
0.962315928
244914_at
3.215984997
A
0.813027629
244915_s_at
14.42633931
A
0.876126837
244916_at
54.85128636
A
0.211798104
244917_at
17.93308922
A
0.671678993
244918_at
10.99607404
A
0.605162372
244919_at
76.15313809
A
0.123873163
244920_s_at
126.3396321
P
0.037684072
Total number of rows:
22810
Table truncated, full table size
799 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM135551.CEL.gz
3.2 Mb
(ftp)
(http)
CEL
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