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| Status |
Public on Feb 14, 2014 |
| Title |
TRIBAL rep1 |
| Sample type |
RNA |
| |
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| Source name |
TRIBAL, HepG2
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| Organism |
Homo sapiens |
| Characteristics |
cell line: HepG2 Hepatoma cells
genotype/variation: TRIBAL overexpression
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| Treatment protocol |
Pool of HepG2 cells stably infected with lentiviruses expressing TRIBAL1 (lncRNA) or empty vector (PLVX)
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| Growth protocol |
low glucose DMEM, 10% serum, pen/strep
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| Extracted molecule |
total RNA |
| Extraction protocol |
Roche total RNA isolation kit
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| Label |
N/A
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| Label protocol |
According to the protocols of the Centre for Applied Genomics (The Hospital for Sick Children, Toronto, Ontario, Canada)
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| Hybridization protocol |
According to the protocols of the Centre for Applied Genomics (The Hospital for Sick Children, Toronto, Ontario, Canada)
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| Scan protocol |
According to the protocols of the Centre for Applied Genomics (The Hospital for Sick Children, Toronto, Ontario, Canada)
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| Description |
TRIBALA
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| Data processing |
According to the protocols of the Centre for Applied Genomics (The Hospital for Sick Children, Toronto, Ontario, Canada)
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| Submission date |
Feb 12, 2014 |
| Last update date |
Jan 29, 2024 |
| Contact name |
Ruth McPherson |
| E-mail(s) |
[email protected]
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| Organization name |
UOHI
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| Street address |
40 Ruskin
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| City |
Ottawa |
| State/province |
Ontario |
| ZIP/Postal code |
K1Y4W7 |
| Country |
Canada |
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| Platform ID |
GPL17586 |
| Series (2) |
| GSE54937 |
TRIBAL overexpression in HepG2 cells |
| GSE54957 |
Functional analysis of the TRIB1 associated locus (TRIBAL) linked to plasma triglycerides and coronary artery disease |
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| Data table header descriptions |
| ID_REF |
|
| VALUE |
RMA signal |
| Data table |
| ID_REF |
VALUE |
| TC01000001.hg.1 |
6.86795 |
| TC01000002.hg.1 |
6.38131 |
| TC01000003.hg.1 |
4.43484 |
| TC01000004.hg.1 |
4.86302 |
| TC01000005.hg.1 |
10.4238 |
| TC01000006.hg.1 |
12.6806 |
| TC01000007.hg.1 |
13.2195 |
| TC01000008.hg.1 |
10.3194 |
| TC01000009.hg.1 |
5.59231 |
| TC01000010.hg.1 |
5.72466 |
| TC01000011.hg.1 |
7.47932 |
| TC01000012.hg.1 |
6.28711 |
| TC01000013.hg.1 |
10.3817 |
| TC01000014.hg.1 |
5.1349 |
| TC01000015.hg.1 |
7.00141 |
| TC01000016.hg.1 |
7.90074 |
| TC01000017.hg.1 |
6.1776 |
| TC01000018.hg.1 |
8.70465 |
| TC01000019.hg.1 |
7.15205 |
| TC01000020.hg.1 |
7.59196 |
Total number of rows: 70523
Table truncated, full table size 1655 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM1326801_HTA2_102313H_RM1_TRIBALA.CEL.gz |
25.5 Mb |
(ftp)(http) |
CEL |
| GSM1326801_HTA2_102313H_RM1_TRIBALA.Gene.rma-gene-full.chp.gz |
458.2 Kb |
(ftp)(http) |
CHP |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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