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GEO accession:
Sample GSM131516
Query DataSets for GSM131516
Status
Public on Jan 08, 2007
Title
ATGE_15_A
Sample type
RNA
Source name
Col-0
Organism
Arabidopsis thaliana
Characteristics
Tissue: rosette leaf # 8
Extracted molecule
total RNA
Label
biotin
Description
Photoperiod: continuous light
Relative humidity: 65%
Substrate: soil
Temperature: 23oC
Tissue comments: leaf #12 was approx. 1 cm long flowering time (n=20): rosette: 11.1 +/- 0.8 cauline: 2.8 +/- 0.6 total: 13.9 +/- 1.1
Data processing
The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
Submission date
Aug 25, 2006
Last update date
Aug 28, 2018
Contact name
Nottingham Arabidopsis Stock Centre (NASC)
E-mail(s)
[email protected]
Phone
+44 (0)115 951 3237
Fax
+44 (0)115 951 3297
URL
http://arabidopsis.info/
Organization name
Nottingham Arabidopsis Stock Centre (NASC)
Department
School of Biosciences, University of Nottingham
Street address
Sutton Bonington Campus
City
Loughborough
ZIP/Postal code
LE12 5RD
Country
United Kingdom
Platform ID
GPL198
Series (1)
GSE5630
AtGenExpress: Developmental series (leaves)
Relations
Reanalyzed by
GSE118579
Reanalyzed by
GSE119083
Data table header descriptions
ID_REF
VALUE
This is the final calculated measurement for each probe set identifier that has been made comparable across all samples and rows
ABS_CALL
A qualitative measurement indicating if the probe set is detected
DETECTION P-VALUE
A p-value indicating the significance of the Detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-r2-P1-cre-5_at
3.60141723632812E+003
P
2.44141003349796E-004
AFFX-r2-P1-cre-3_at
3.93333105468750E+003
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-5_at
6.40164123535156E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioD-3_at
8.34224731445312E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-5_at
2.47709106445312E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioC-3_at
2.32202606201172E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-M_at
1.16324050903320E+002
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-5_at
9.06916122436523E+001
P
2.44141003349796E-004
AFFX-r2-Ec-bioB-3_at
9.95978546142578E+001
P
2.44141003349796E-004
AFFX-r2-Bs-thr-M_s_at
1.08117961883545E+000
A
7.53906011581421E-001
AFFX-r2-Bs-thr-5_s_at
7.40292167663574E+000
A
8.05663987994194E-002
AFFX-r2-Bs-thr-3_s_at
2.13635039329529E+000
A
7.53906011581421E-001
AFFX-r2-Bs-phe-M_at
1.96611702442169E+000
A
5.00000000000000E-001
AFFX-r2-Bs-phe-5_at
5.15598654747009E-001
A
8.70360970497131E-001
AFFX-r2-Bs-phe-3_at
4.22340679168701E+000
A
6.01073980331421E-001
AFFX-r2-Bs-lys-M_at
3.01745247840881E+000
A
2.66845703125000E-001
AFFX-r2-Bs-lys-5_at
4.05552053451538E+000
A
3.98925989866257E-001
AFFX-r2-Bs-lys-3_at
2.21002078056335E+000
A
1.88720703125000E-001
AFFX-r2-Bs-dap-M_at
1.77214825153351E+000
A
6.33789002895355E-001
AFFX-r2-Bs-dap-5_at
2.20889881253242E-001
A
9.94140982627869E-001
Total number of rows:
22810
Table truncated, full table size
1250 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM131516.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
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