|
| Status |
Public on Aug 15, 2006 |
| Title |
Underwood_1-37_E.coli-0157-H7-10e8-7h_Rep3_ATH1 |
| Sample type |
RNA |
| |
|
| Source name |
Col-5
|
| Organism |
Arabidopsis thaliana |
| Characteristics |
Stock Code: N1644
Tissue: Leaves
|
| Treatment protocol |
Plants were inoculated by vacuum infiltration with a suspension of E. coli O157:H7 bacteria at a concentration of 10e8 cfu/ml. Inoculated leaf tissue from at least 15 plants was collected 7 hours after inoculation for RNA isolation.
|
| Extracted molecule |
total RNA |
| Label |
biotin
|
| |
|
| Description |
stratification: Stratified 3 days at 4degC
growth protocol: Arabidopsis thaliana accession Col-0 plants were grown in soil in growth chambers with a day/night cycle of 12 h/12 h, a light intensity of 100 µE, and a constant temperature of 20°C. Four- to 5-week-old plants were used for experiments.
Location: Growth chamber
Growth substrate: Commercial soil
Watering: flats were watered every 2-3 days
|
| Data processing |
The data were analysed using Affymetrix Microarray Suite 5.0 (MAS5)
|
| |
|
| Submission date |
Aug 15, 2006 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Nottingham Arabidopsis Stock Centre (NASC) |
| E-mail(s) |
[email protected]
|
| Phone |
+44 (0)115 951 3237
|
| Fax |
+44 (0)115 951 3297
|
| URL |
http://arabidopsis.info/
|
| Organization name |
Nottingham Arabidopsis Stock Centre (NASC)
|
| Department |
School of Biosciences, University of Nottingham
|
| Street address |
Sutton Bonington Campus
|
| City |
Loughborough |
| ZIP/Postal code |
LE12 5RD |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL198 |
| Series (1) |
| GSE5520 |
Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction |
|
| Relations |
| Reanalyzed by |
GSE119083 |
