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Status
Public on Mar 16, 2004
Title
laminin binding germ cells GPL342
Sample type
RNA
Source name
germ cells from 22 day old rat testis, cultured
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
50 ng total RNA were amplified using two rounds of amplification. Detection calls were calculated using a Tau value of 0.015. Signal intensities were scaled to an average of 250 (scale factor 4.009).
Submission date
Nov 10, 2003
Last update date
May 28, 2005
Contact name
Nikolaus Schultz
E-mail(s)
[email protected] Phone
646-888-2604
Organization name
Memorial Sloan-Kettering Cancer Center
Department
Computational Biology Center
Street address
1275 York Ave, Box 460
City
New York
State/province
NY
ZIP/Postal code
10065
Country
USA
Platform ID
GPL342 Series (1)
Data table header descriptions ID_REF Affymetrix probe id
VALUE signal intensity
ABS_CALL present (P), absent (A), marginal (M) call
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
832.2
P
0.001102
AFFX-BioB-M_at
1149.5
P
0.00007
AFFX-BioB-3_at
634.3
P
0.000044
AFFX-BioC-5_at
1650.9
P
0.00007
AFFX-BioC-3_at
845.9
P
0.000044
AFFX-BioDn-5_at
1616.1
P
0.000662
AFFX-BioDn-3_at
5917.9
P
0.000052
AFFX-CreX-5_at
15321
P
0.000044
AFFX-CreX-3_at
16216.2
P
0.000044
AFFX-DapX-5_at
7.3
A
0.354453
AFFX-DapX-M_at
7.6
A
0.58862
AFFX-DapX-3_at
7
A
0.949771
AFFX-LysX-5_at
8.3
A
0.724854
AFFX-LysX-M_at
4.1
A
0.868639
AFFX-LysX-3_at
28.5
A
0.5
AFFX-PheX-5_at
22.6
A
0.712257
AFFX-PheX-M_at
4.5
A
0.916408
AFFX-PheX-3_at
34.4
A
0.544587
AFFX-ThrX-5_at
8.3
A
0.804734
AFFX-ThrX-M_at
21.7
A
0.544587
15333 408 Kbytes .Supplementary file Size Download File type/resource GSM12805.CEL.gz
2.4 Mb
(ftp) (http) CEL
