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Sample GSM124990 Query DataSets for GSM124990
Status Public on Aug 08, 2006
Title Double_positive_thymocytes_Dexamethasone (1E-07 M) _3h_rep1
Sample type RNA
 
Source name CD4+CD8+ double positive (DP) thymocytes 3h Dexamethasone(DEX) (final concentration 1E-07 M) treated
Organism Mus musculus
Characteristics Strain: C3H/HeN
Gender: female
Age: 4 weeks
Tissue: thymus
Treatment protocol CD4+CD8+ double positive thymocytes were treated with medium and Dexamethasone (final concentration 1E-07 M) in PBS for 3 hours
Growth protocol CD4+CD8+ double positive thymocytes were plated in 6 well plates with 3 ml of the culture medium at a concentration of 5.0E+06 cell/ml and kept at 37°C , 5% CO2 in a humidified atmosphere for 3 hours
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with TRIzol LS reagent(Invitrogen)
Label biotin
 
Description Thymi from 4 week old C3H/HeN mice were teased in culture medium, CD4+CD8+ double positive (DP) thymocytes were sorted with microbeads Miltenyi Biotech methods and were plated in 6 well plates with 3 ml of the culture medium at a concentration of 5.0E+06 cell/ml together with 1E-07 M Dexamethasone or a corresponding volume of PBS. DP thymocytes were kept at 37°C, 5% CO2 in a humidified atmosphere for 3 hours
Data processing MAS 5.0
 
Submission date Aug 04, 2006
Last update date Aug 07, 2006
Contact name Carlo Riccardi
E-mail(s) [email protected]
Phone +390755857467
Fax +390755857405
Organization name Università degli Studi di Perugia
Department Clinical and Experimetal Medicine
Lab Pharmacology, Toxicology, Chemotherapy
Street address via del Giochetto
City Perugia
State/province Perugia
ZIP/Postal code 06100
Country Italy
 
Platform ID GPL81
Series (1)
GSE5463 Modulation of pro- and antiapoptotic molecules in double-positive (CD4+CD8+) thymocytes following dexamethasone treatmen

Data table header descriptions
ID_REF
VALUE MAS5.0-calculated signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
100001_at 1498.4 P 0.000219
100002_at 8.3 A 0.458816
100003_at 4 A 0.458816
100004_at 112.7 P 0.000468
100005_at 128 P 0.000322
100006_at 4.5 A 0.138765
100007_at 265.3 P 0.000388
100009_r_at 2.6 A 0.602023
100010_at 36.7 P 0.000673
100011_at 92.5 P 0.000322
100012_at 2090.4 P 0.000219
100013_at 99.3 P 0.000673
100014_at 82.3 P 0.000322
100015_at 9 A 0.162935
100016_at 5.2 P 0.011447
100017_at 9.6 A 0.284747
100018_at 34.4 A 0.07383
100019_at 2.5 A 0.88284
100020_at 167.4 P 0.000266
100021_at 1.3 A 0.697453

Total number of rows: 12488

Table truncated, full table size 312 Kbytes.




Supplementary data files not provided

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