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Sample GSM12379 Query DataSets for GSM12379
Status Public on Oct 24, 2003
Title PGA_MI_nilv_8w_326
Sample type RNA
 
Source name Region of the left ventricle above the infarction (above the LAD artery)
Organism Mus musculus
Extracted molecule total RNA
 
Description This dataset is a time series (1 hour [h], 4 hours, 24 hours, 48 hours, 1 week [w], and 8 weeks) intended to compare normal functioning left ventricles [lv + lv2] with infarcted [ilv] and non-infarcted left ventricles [nilv]. Ilv samples are taken from the region between the LAD artery and the apex on a mouse with myocardial infarction. Lv2 samples are from the same region in a sham operated mouse. Nilv samples are taken from the region above the infartion and the left ventricle [lv] samples mimic that region in a sham mouse. The lv and lv2 samples can be compared as both are from normal functioning hearts. For more information visit http://cardiogenomics.med.harvard.edu/groups/proj1/pages/mi_home.html
Keywords = acute myocardial infarction, AMI, cardiac
 
Submission date Oct 23, 2003
Last update date May 28, 2005
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL81
Series (1)
GSE775 Mouse model of myocardial infarction

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION_P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION_P-VALUE
AFFX-MurIL2_at 18.4 A 0.843268
AFFX-MurIL10_at 59.9 A 0.41138
AFFX-MurIL4_at 29.6 A 0.48511
AFFX-MurFAS_at 310.8 P 0.001796
AFFX-BioB-5_at 446.8 P 0.004998
AFFX-BioB-M_at 823.4 P 0.00011
AFFX-BioB-3_at 322.1 P 0.00039
AFFX-BioC-5_at 1245.1 P 0.000169
AFFX-BioC-3_at 904.1 P 0.00007
AFFX-BioDn-5_at 1555.1 P 0.000052
AFFX-BioDn-3_at 6433.4 P 0.000147
AFFX-CreX-5_at 13349.7 P 0.000052
AFFX-CreX-3_at 17677.7 P 0.000044
AFFX-BioB-5_st 71.6 A 0.275146
AFFX-BioB-M_st 85.6 A 0.58862
AFFX-BioB-3_st 35 A 0.737173
AFFX-BioC-5_st 18.2 A 0.868639
AFFX-BioC-3_st 11.7 A 0.686277
AFFX-BioDn-5_st 160.8 A 0.139482
AFFX-BioDn-3_st 251.9 P 0.013811

Total number of rows: 12488

Table truncated, full table size 321 Kbytes.




Supplementary file Size Download File type/resource
GSM12379.CEL.gz 2.8 Mb (ftp)(http) CEL

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