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Sample GSM12346 Query DataSets for GSM12346
Status Public on Oct 24, 2003
Title PGA_MI_ilv_1h_394
Sample type RNA
 
Source name Region of the heart between the LAD artery and the apex on a mouse with myocardial infarction (The infarcted area)
Organism Mus musculus
Extracted molecule total RNA
 
Description This dataset is a time series (1 hour [h], 4 hours, 24 hours, 48 hours, 1 week [w], and 8 weeks) intended to compare normal functioning left ventricles [lv + lv2] with infarcted [ilv] and non-infarcted left ventricles [nilv]. Ilv samples are taken from the region between the LAD artery and the apex on a mouse with myocardial infarction. Lv2 samples are from the same region in a sham operated mouse. Nilv samples are taken from the region above the infartion and the left ventricle [lv] samples mimic that region in a sham mouse. The lv and lv2 samples can be compared as both are from normal functioning hearts. For more information visit http://cardiogenomics.med.harvard.edu/groups/proj1/pages/mi_home.html
Keywords = acute myocardial infarction, AMI, cardiac
 
Submission date Oct 23, 2003
Last update date May 28, 2005
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL81
Series (1)
GSE775 Mouse model of myocardial infarction

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION_P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION_P-VALUE
AFFX-MurIL2_at 31.4 A 0.672921
AFFX-MurIL10_at 70.8 A 0.382599
AFFX-MurIL4_at 30.3 A 0.51489
AFFX-MurFAS_at 112.1 P 0.011384
AFFX-BioB-5_at 439.6 P 0.00141
AFFX-BioB-M_at 742.7 P 0.000195
AFFX-BioB-3_at 407.3 P 0.000446
AFFX-BioC-5_at 1144.7 P 0.000195
AFFX-BioC-3_at 811.4 P 0.000044
AFFX-BioDn-5_at 1572 P 0.00006
AFFX-BioDn-3_at 7399.1 P 0.000127
AFFX-CreX-5_at 14470.7 P 0.000044
AFFX-CreX-3_at 17573.4 P 0.000044
AFFX-BioB-5_st 75.2 A 0.227636
AFFX-BioB-M_st 25.3 A 0.659339
AFFX-BioB-3_st 44 A 0.712257
AFFX-BioC-5_st 24.7 A 0.760937
AFFX-BioC-3_st 17 A 0.686277
AFFX-BioDn-5_st 310.6 P 0.030976
AFFX-BioDn-3_st 180.8 M 0.050229

Total number of rows: 12488

Table truncated, full table size 321 Kbytes.




Supplementary file Size Download File type/resource
GSM12346.CEL.gz 2.8 Mb (ftp)(http) CEL

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