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GEO accession:
Sample GSM120169
Query DataSets for GSM120169
Status
Public on Sep 30, 2007
Title
2002-01-10_2399-10
Sample type
RNA
Channel 1
Source name
Yeast yox1mutant cell cycle-time point 10 min
Organism
Saccharomyces cerevisiae
Characteristics
Yeast yox1 mutant cell cycle-time point 10 min
Treatment protocol
Cells were arrested with alpha factor,and released into YEPD to get a synchronized population. Cells were sampled every 10 min after relase.
Extracted molecule
total RNA
Label
Cy5
Channel 2
Source name
Yeast (wild type) asynchronous culture
Organism
Saccharomyces cerevisiae
Characteristics
Yeast (wild type) asynchronous culture
Treatment protocol
Cells were grown overnight to an OD of 0.6 in YEPD
Extracted molecule
total RNA
Label
Cy3
Description
Yeast yox1 mutant cell cycle
Data processing
log10 ratio of medians[(F635-B635)/(F532-BF532)], normalized
Submission date
Jul 13, 2006
Last update date
Mar 21, 2007
Contact name
Tata Pramila
E-mail(s)
[email protected]
Phone
(206)6674483
Organization name
FHCRC
Department
Basic Sciences
Lab
Breeden Lab
Street address
1100, Fairview Avenue N
City
Seattle
State/province
WA
ZIP/Postal code
98109
Country
USA
Platform ID
GPL1914
Series (1)
GSE5376
Cell cycle of yeast deleted for yox1
Data table header descriptions
ID_REF
Array identifier
VALUE
same as UNF_VALUE but with flagged values removed
RATIO
FLAG
UNF_VALUE
Normalized, log10 ratio of medians defined as Ch1 divided by Ch2[(F635-B635)/(F532-BF532)]
Data table
ID_REF
VALUE
RATIO
FLAG
UNF_VALUE
blank
0.017135017
1.040243506
FALSE
0.017135017
E. coli control
53.79661942
TRUE
1.730754972
empty
59.87609863
TRUE
1.777253509
Human Control
0.291203916
1.955257297
FALSE
0.291203916
Lambda Control
0.632853985
4.293920517
FALSE
0.632853985
n1
0.033376731
1.079883099
FALSE
0.033376731
n2
0.032033935
1.076549292
FALSE
0.032033935
p1
0.043113381
1.104366899
FALSE
0.043113381
p2
0.066262789
1.164830685
FALSE
0.066262789
Phi174 Control
0.042310093
TRUE
-1.373556018
YAL001C
0.111506656
1.292726517
FALSE
0.111506656
YAL002W
0.205593318
1.60543716
FALSE
0.205593318
YAL003W
0.015315533
1.035894513
FALSE
0.015315533
YAL004W
-0.551728845
0.280718565
FALSE
-0.551728845
YAL005C
-0.097649321
0.798639298
FALSE
-0.097649321
YAL007C
-0.007192103
0.98357594
FALSE
-0.007192103
YAL008W
0.049465627
1.120638728
FALSE
0.049465627
YAL009W
0.082528457
1.209284425
FALSE
0.082528457
YAL010C
-0.142550185
0.720194519
FALSE
-0.142550185
YAL011W
0.021369951
1.050436854
FALSE
0.021369951
Total number of rows:
6228
Table truncated, full table size
306 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM120169.gpr.gz
479.4 Kb
(ftp)
(http)
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