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Sample GSM120041 Query DataSets for GSM120041
Status Public on Sep 30, 2007
Title 2001-08-15_2399-25
Sample type RNA
 
Channel 1
Source name Yeast yox1mutant cell cycle-time point 25 min
Organism Saccharomyces cerevisiae
Characteristics Yeast yox1 mutant cell cycle-time point 25 min
Treatment protocol Cells were arrested with alpha factor,and released into YEPD to get a synchronized population. Cells were sampled every 10 min after relase.
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Yeast (wild type) asynchronous culture
Organism Saccharomyces cerevisiae
Characteristics Yeast (wild type) asynchronous culture
Treatment protocol Cells were grown overnight to an OD of 0.6 in YEPD
Extracted molecule total RNA
Label Cy3
 
 
Description Yeast yox1 mutant cell cycle
Data processing log10 ratio of medians[(F635-B635)/(F532-BF532)], normalized
 
Submission date Jul 12, 2006
Last update date Mar 21, 2007
Contact name Tata Pramila
E-mail(s) [email protected]
Phone (206)6674483
Organization name FHCRC
Department Basic Sciences
Lab Breeden Lab
Street address 1100, Fairview Avenue N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL1914
Series (1)
GSE5376 Cell cycle of yeast deleted for yox1

Data table header descriptions
ID_REF Array identifier
VALUE same as UNF_VALUE but with flagged values removed
FLAG
UNF_VALUE Normalized, log10 ratio of medians defined as Ch1 divided by Ch2[(F635-B635)/(F532-BF532)]

Data table
ID_REF VALUE FLAG UNF_VALUE
blank 0.273345798 FALSE 0.273345798
E. coli control 2 FALSE 2
empty TRUE 2
Human Control 1.189436913 FALSE 1.189436913
Lambda Control TRUE 2
n1 0.003392296 FALSE 0.003392296
n2 0.046523269 FALSE 0.046523269
p1 0.15322277 FALSE 0.15322277
p2 0.108984195 FALSE 0.108984195
Phi174 Control TRUE 2
YAL001C 0.222365513 FALSE 0.222365513
YAL002W -0.12610212 FALSE -0.12610212
YAL003W -0.131802842 FALSE -0.131802842
YAL004W -1.653157115 FALSE -1.653157115
YAL005C -0.728761196 FALSE -0.728761196
YAL007C 0.543631494 FALSE 0.543631494
YAL008W TRUE 1.086845636
YAL009W 0.132110745 FALSE 0.132110745
YAL010C -0.069348812 FALSE -0.069348812
YAL011W 0.034278464 FALSE 0.034278464

Total number of rows: 6228

Table truncated, full table size 226 Kbytes.




Supplementary file Size Download File type/resource
GSM120041.gpr.gz 512.4 Kb (ftp)(http) GPR

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