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Sample GSM118468 Query DataSets for GSM118468
Status Public on Aug 31, 2006
Title Yeast yox1yhp1 mutant cell cycle-time point 50 min 2001-04-12_2665-50
Sample type RNA
 
Channel 1
Source name Yeast yox1yhp1 mutant cell cycle-time point 50 min
Organism Saccharomyces cerevisiae
Characteristics Yeast yox1yhp1 mutant cell cycle-time point 50 min
Treatment protocol Cells were arrested with alpha factor,and released into YEPD to get a synchronized population. Cells were sampled every 10 min after relase.
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Yeast (wild type) asynchronous culture
Organism Saccharomyces cerevisiae
Characteristics Yeast (wild type) asynchronous culture
Treatment protocol Cells were grown overnight to an OD of 0.6 in YEPD
Extracted molecule total RNA
Label Cy3
 
 
Description Yeast yox1yhp1 mutant cell cycle
Data processing log10 ratio of medians[(F635-B635)/(F532-BF532)], normalized
 
Submission date Jul 05, 2006
Last update date Jul 11, 2006
Contact name Tata Pramila
E-mail(s) [email protected]
Phone (206)6674483
Organization name FHCRC
Department Basic Sciences
Lab Breeden Lab
Street address 1100, Fairview Avenue N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL1914
Series (1)
GSE5283 Yeast W303 yox1yhp1 mutant cell cycle

Data table header descriptions
ID_REF Array identifier
VALUE same as UNF_VALUE but with flagged values removed
Ratio
Flagged? FALSE for good spot and TRUE for bad spot
UNF_VALUE Normalized, log10 ratio of medians defined as Ch1 divided by Ch2[(F635-B635)/(F532-BF532)]

Data table
ID_REF VALUE Ratio Flagged? UNF_VALUE
blank -0.004407768 0.989902079 FALSE -0.004407768
E. coli control 0.094653674 1.243522525 FALSE 0.094653674
empty 0.020674467 TRUE -1.684565663
Human Control 0.091947265 1.235797405 FALSE 0.091947265
Lambda Control 0.108301006 1.283219695 FALSE 0.108301006
n1 0.047822677 1.116407275 FALSE 0.047822677
n2 0.011674418 1.027245879 FALSE 0.011674418
p1 0.014117778 1.033041477 FALSE 0.014117778
p2 -0.030096004 0.93304801 FALSE -0.030096004
Phi174 Control 0.177373275 1.504434466 FALSE 0.177373275
YAL001C -0.061032258 0.868895888 FALSE -0.061032258
YAL002W 0.042911049 1.103852511 FALSE 0.042911049
YAL003W -0.029103125 0.935183585 FALSE -0.029103125
YAL004W -0.002629286 0.993964136 FALSE -0.002629286
YAL005C 0.083027832 1.210675716 FALSE 0.083027832
YAL007C -0.0285901 0.936288953 FALSE -0.0285901
YAL008W -0.040617574 0.910714865 FALSE -0.040617574
YAL009W 0.051384077 1.12559998 FALSE 0.051384077
YAL010C -0.002372238 0.994552612 FALSE -0.002372238
YAL011W 0.045914043 1.111511707 FALSE 0.045914043

Total number of rows: 6228

Table truncated, full table size 306 Kbytes.




Supplementary file Size Download File type/resource
GSM118468.gpr.gz 492.5 Kb (ftp)(http) GPR

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