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Sample GSM118466 Query DataSets for GSM118466
Status Public on Aug 31, 2006
Title Yeast yox1yhp1 mutant cell cycle-time point 30 min 2001-04-12_2665-30
Sample type RNA
 
Channel 1
Source name Yeast yox1yhp1 mutant cell cycle-time point 30 min
Organism Saccharomyces cerevisiae
Characteristics Yeast yox1yhp1 mutant cell cycle-time point 30 min
Treatment protocol Cells were arrested with alpha factor,and released into YEPD to get a synchronized population. Cells were sampled every 10 min after relase.
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Yeast (wild type) asynchronous culture
Organism Saccharomyces cerevisiae
Characteristics Yeast (wild type) asynchronous culture
Treatment protocol Cells were grown overnight to an OD of 0.6 in YEPD
Extracted molecule total RNA
Label Cy3
 
 
Description Yeast yox1yhp1 mutant cell cycle
Data processing log10 ratio of medians[(F635-B635)/(F532-BF532)], normalized
 
Submission date Jul 05, 2006
Last update date Jul 11, 2006
Contact name Tata Pramila
E-mail(s) [email protected]
Phone (206)6674483
Organization name FHCRC
Department Basic Sciences
Lab Breeden Lab
Street address 1100, Fairview Avenue N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL1914
Series (1)
GSE5283 Yeast W303 yox1yhp1 mutant cell cycle

Data table header descriptions
ID_REF Array identifier
VALUE same as UNF_VALUE but with flagged values removed
Ratio
Flagged? FALSE for good spot and TRUE for bad spot
UNF_VALUE Normalized, log10 ratio of medians defined as Ch1 divided by Ch2[(F635-B635)/(F532-BF532)]

Data table
ID_REF VALUE Ratio Flagged? UNF_VALUE
blank 0.022855949 1.054037213 FALSE 0.022855949
E. coli control 0.08479882 1.215622783 FALSE 0.08479882
empty 1.116569877 TRUE 0.047885925
Human Control -0.064034149 0.862910688 FALSE -0.064034149
Lambda Control 0.119354367 1.316298485 FALSE 0.119354367
n1 0.036137413 1.086769462 FALSE 0.036137413
n2 0.019449486 1.045801997 FALSE 0.019449486
p1 0.000318002 1.000732541 FALSE 0.000318002
p2 0.017070336 1.040088654 FALSE 0.017070336
Phi174 Control 0.14230606 1.38773346 FALSE 0.14230606
YAL001C 0.093101084 1.239084959 FALSE 0.093101084
YAL002W 0.062548667 1.154911399 FALSE 0.062548667
YAL003W 0.006460833 1.014987826 FALSE 0.006460833
YAL004W 0.00673583 1.015630722 FALSE 0.00673583
YAL005C 0.159995467 1.445424676 FALSE 0.159995467
YAL007C 0.147978887 1.405979157 FALSE 0.147978887
YAL008W 0.013775532 1.032227755 FALSE 0.013775532
YAL009W 0.032085083 1.07667613 FALSE 0.032085083
YAL010C -0.07646741 0.838557005 FALSE -0.07646741
YAL011W 0.11482086 1.302629352 FALSE 0.11482086

Total number of rows: 6228

Table truncated, full table size 307 Kbytes.




Supplementary file Size Download File type/resource
GSM118466.gpr.gz 481.3 Kb (ftp)(http) GPR

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