|
| Status |
Public on Aug 08, 2013 |
| Title |
liver, S, A1359-20 |
| Sample type |
RNA |
| |
|
| Source name |
Steatosis, before surgery
|
| Organism |
Homo sapiens |
| Characteristics |
tissue type: liver biopsy
group: Steatosis
fat: 30
inflammation: 0
other_id: A1359-58.CEL
bariatric surgery: before surgery
Sex: female
age: 32
bmi: 48.6
nas: 1
fibrosis: 1
lar: 7.6524656
delta lar: NA
delta leptin: NA
leptin: 42.211
adiponectin: 5.516
delta adipo: NA
|
| Treatment protocol |
not applicable
|
| Growth protocol |
liver biopsy
|
| Extracted molecule |
total RNA |
| Extraction protocol |
For homogenisation of five to ten milligram frozen tissue and subsequent nucleic acid isolation, tubes with 1,4 mm ceramic beads (Precellys, Villeurbanne, France) and the AllPrep DNA/RNA Mini Kit (QIAGEN, Hilden, Germany) were used.
|
| Label |
biotin
|
| Label protocol |
according to the manufacturers protocols
|
| |
|
| Hybridization protocol |
according to the manufacturers protocols
|
| Scan protocol |
according to the manufacturers protocols
|
| Data processing |
RMA normalization with Bioconductor package oligo
|
| |
|
| Submission date |
Jul 01, 2013 |
| Last update date |
Aug 08, 2013 |
| Contact name |
Timo Itzel |
| E-mail(s) |
[email protected]
|
| Organization name |
Universitätsklinikum Regensburg
|
| Street address |
Franz-Josef-Strauß-Allee 11
|
| City |
Regensburg |
| ZIP/Postal code |
93042 |
| Country |
Germany |
| |
|
| Platform ID |
GPL11532 |
| Series (1) |
| GSE48452 |
Human liver biopsy of different phases from control to NASH |
|
