|
| Status |
Public on Jun 19, 2013 |
| Title |
blood-schizophrenia case sample 1 |
| Sample type |
RNA |
| |
|
| Source name |
lymphocytes
|
| Organism |
Homo sapiens |
| Characteristics |
gender: MALE
affection status: CASE
condition: schizophrenia
cell type: lymphocyte
|
| Extracted molecule |
total RNA |
| Extraction protocol |
The isolated RNAs were amplified and labelled using the Illumina TotalPrep RNA Amplification kit (Ambion)
|
| Label |
biotin
|
| Label protocol |
The isolated RNAs were amplified and labelled using the Illumina TotalPrep RNA Amplification kit (Ambion)
|
| |
|
| Hybridization protocol |
RNA was hybridized to the Illumina Whole-Genome Expression Beadchips (HT12-v4), using the standard Illumina Hybridization Protocol.
|
| Scan protocol |
Standard Illumina scanning protocol, using iScan.
|
| Description |
RNA analysis in Finnish Schizophrenia Families
SAMPLE 1
|
| Data processing |
Missing intensities were removed, raw intensites were quantile normalized and log2 transformed. Poorly variable probe sets were removed by utilising their inter-quantile range (IQR), cut-off value of 0.7 .
|
| |
|
| Submission date |
Jun 18, 2013 |
| Last update date |
Jun 20, 2013 |
| Contact name |
William Hennah |
| E-mail(s) |
[email protected]
|
| Organization name |
Institute for Molecular Medicine Finland, FIMM
|
| Street address |
FIMM, PO Box 20
|
| City |
Helsinki |
| ZIP/Postal code |
FI-00014 |
| Country |
Finland |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE48072 |
RNA analysis in Finnish Schizophrenia Families |
|
