NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM114773 Query DataSets for GSM114773
Status Public on Jul 04, 2008
Title Pineal Culture CT6 NE vs. Vehicle Replicate 2
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 6 hours after beginning of subjective day with 6-hour NE administration
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 6 hours after beginning of subjective day with 6-hour vehicle administration
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture CT6 NE vs. Vehicle Replicate 2
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 15, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) [email protected]
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -1.64815103843154
2 0.336472236621213
3 -1.60251890407331
4 -0.370975670771127
5 -1.50891556686878
6 null
7 -1.48645950722374
8 0.00842183656804645
9 -1.41975034311097
10 -0.547126188705246
11 -1.38778575269164
12 -0.127055901091078
13 -0.584203703381732
14 -0.591588020909433
15 -2.24138444887502
16 -0.190613802630147
17 -0.279430477362923
18 -0.445969809221297
19 -0.242820886459779
20 -0.135959824594315

Total number of rows: 8084

Table truncated, full table size 184 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap