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Sample GSM114483 Query DataSets for GSM114483
Status Public on Jul 04, 2008
Title Pineal Culture DD CT2 Replicate 7
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 2 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture DD CT2 Replicate 7
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 14, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) [email protected]
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.110760849022367
2 0.111383938369076
3 -0.472071141076115
4 -0.0786726050263038
5 -0.593620991534503
6 -0.408622587704495
7 -0.621715658333632
8 -0.150674296123998
9 -0.278926210468179
10 -0.510384720977911
11 -0.345431573890766
12 -0.0774332486085301
13 -0.139112308432989
14 -0.0471418184380028
15 -0.921295987292085
16 -0.000614688882507793
17 0.160373364418304
18 -4.60517018598809
19 0.188851192248785
20 0.0787867808659945

Total number of rows: 8084

Table truncated, full table size 184 Kbytes.




Supplementary data files not provided

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