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GEO accession:
Sample GSM113368
Query DataSets for GSM113368
Status
Public on Jul 27, 2006
Title
25 uM cyfluthrin batch 1
Sample type
RNA
Source name
25 uM cyfluthrin batch 1
Organism
Homo sapiens
Characteristics
astrocytes from second trimester human fetal brains
Extracted molecule
total RNA
Label
biotin
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
astrocytes from second trimester (14-19 weeks) human fetal brains
Data processing
Affymetrix Microarray Suite version 5.0
Submission date
Jun 08, 2006
Last update date
Jul 27, 2006
Contact name
Sarah Mense
E-mail(s)
[email protected]
Organization name
Columbia University
Department
Environmental Health Sciences
Lab
Dr. Zhang
Street address
722 West 168th Street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL570
Series (1)
GSE5023
The Insecticides Cyfluthrin & Chlorpyrifos Alter Expression of Genes with Diverse Functions in Primary Human Astrocytes
Data table header descriptions
ID_REF
Affymetrix ID reference
VALUE
GCOS 1.2-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
399.4
P
0.000754
AFFX-BioB-M_at
606.5
P
0.000147
AFFX-BioB-3_at
263.2
P
0.000225
AFFX-BioC-5_at
1238
P
0.00006
AFFX-BioC-3_at
1053.7
P
0.000052
AFFX-BioDn-5_at
2077.7
P
0.000044
AFFX-BioDn-3_at
6369.6
P
0.000081
AFFX-CreX-5_at
13348.8
P
0.000052
AFFX-CreX-3_at
13632.7
P
0.000044
AFFX-DapX-5_at
11.5
A
0.327079
AFFX-DapX-M_at
14
A
0.5
AFFX-DapX-3_at
5.6
A
0.794268
AFFX-LysX-5_at
16.1
A
0.425962
AFFX-LysX-M_at
5
A
0.737173
AFFX-LysX-3_at
11.4
A
0.5
AFFX-PheX-5_at
5.6
A
0.804734
AFFX-PheX-M_at
3.1
A
0.969024
AFFX-PheX-3_at
8.1
A
0.804734
AFFX-ThrX-5_at
8.8
A
0.699394
AFFX-ThrX-M_at
18.8
A
0.5
Total number of rows:
54675
Table truncated, full table size
1432 Kbytes
.
Supplementary data files not provided
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