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Sample GSM113149 Query DataSets for GSM113149
Status Public on Jul 04, 2008
Title Pineal Culture LD ZT14 Replicate 9
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 14 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture LD ZT14 Replicate 9
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 06, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) [email protected]
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.491846701634856
2 0.0402476856364744
3 0.0117183709091982
4 -0.149704387584419
5 0.167342173930699
6 -0.597457072937335
7 0.152554291992267
8 -0.340949032534993
9 0.223869128019756
10 -0.299512307885475
11 -0.0966284182990197
12 -0.182617320527736
13 -0.172124492025667
14 -0.687191610227591
15 -0.585779332941647
16 -0.0640772941857431
17 -0.188833433113199
18 -1.49060729235261
19 -0.143945315491293
20 -0.341584662830021

Total number of rows: 8084

Table truncated, full table size 186 Kbytes.




Supplementary data files not provided

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