NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM113081 Query DataSets for GSM113081
Status Public on Jul 04, 2008
Title Pineal Culture LD ZT14 Replicate 2
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 14 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture LD ZT14 Replicate 2
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 06, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) [email protected]
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.244315171754035
2 -0.293939113636645
3 -0.24258787280958
4 0.0558610114662358
5 -0.241959975069005
6 -0.0559242110757292
7 -0.0982830644500555
8 -0.306824797531331
9 -0.680795181566454
10 -0.453049352690992
11 -0.300291369892159
12 -0.10263826878085
13 -0.0979780113042531
14 -0.186220547990924
15 -0.177895486311113
16 0.351000474546751
17 -0.134280358743923
18 -4.60517018598809
19 -0.0436161549699462
20 0.535555796626576

Total number of rows: 8084

Table truncated, full table size 183 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap