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Sample GSM109308 Query DataSets for GSM109308
Status Public on May 26, 2006
Title Hog1 ChIP-Chip repeat 1
Sample type genomic
 
Channel 1
Source name Hog1-3HA (MAP51) ChIP
Organism Saccharomyces cerevisiae
Characteristics MAP 51 cells with genomic 3HA tag at the Hog1 N-terminus
Treatment protocol Chromatin immunoprecipitated with anti-HA (12CA5) monoclonal antibody, labeled with Cy5
Growth protocol YPD + 0.4M NaCl for 5 min
Extracted molecule genomic DNA
Label Cy5
 
Channel 2
Source name Hog1-3HA (MAP51) total DNA
Organism Saccharomyces cerevisiae
Characteristics MAP 51 cells with genomic 3HA tag at the Hog1 N-terminus
Treatment protocol Total chromatin, labeled with Cy3
Growth protocol YPD + 0.4M NaCl for 5 min
Extracted molecule genomic DNA
Label Cy3
 
 
Description Immunoprecipitated sample value divided by total DNA value
Data processing Ratio of ChIP sample value to total DNA value
 
Submission date May 18, 2006
Last update date May 25, 2006
Contact name Markus Proft
E-mail(s) [email protected]
Phone +34-3877007 74225
Fax +34-3877859
Organization name Universidad Politecnica Valencia
Department Inst. Biol. Molecular Celular de Plantas
Street address Camino de Vera s/n
City Valencia
ZIP/Postal code 46022
Country Spain
 
Platform ID GPL1689
Series (1)
GSE4862 Hog1 ChIP Chip

Data table header descriptions
ID_REF
VALUE log ratio
NORM635 fluorescence 635
NORM532 fluorescence 532

Data table
ID_REF VALUE NORM635 NORM532
1 NULL NULL NULL
2 NULL NULL NULL
3 -0.392 2038 2674
4 NULL NULL NULL
5 NULL NULL NULL
6 NULL NULL NULL
7 NULL NULL NULL
8 0.17 971 863
9 -0.196 494 566
10 NULL NULL NULL
11 0.021 1051 1036
12 NULL NULL NULL
13 NULL NULL NULL
14 NULL NULL NULL
15 -0.124 2122 2313
16 0.488 2214 1579
17 -0.417 2490 3324
18 -0.382 336 438
19 0.162 1114 996
20 NULL NULL NULL

Total number of rows: 6438

Table truncated, full table size 133 Kbytes.




Supplementary data files not provided

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