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Sample GSM108391

Query DataSets for GSM108391

Status

Public on Jun 27, 2006

Title

M000921_B

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: female
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: BRAFV600E
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma of the epigastrium.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL97

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	790.1	P
AFFX-BioB-M_at	1422.9	P
AFFX-BioB-3_at	503.4	M
AFFX-BioC-5_at	2250	P
AFFX-BioC-3_at	1535.9	P
AFFX-BioDn-5_at	1436.2	P
AFFX-BioDn-3_at	13949	P
AFFX-CreX-5_at	17700.9	P
AFFX-CreX-3_at	28599.2	P
AFFX-DapX-5_at	25.2	A
AFFX-DapX-M_at	202.1	A
AFFX-DapX-3_at	32.8	A
AFFX-LysX-5_at	95.5	A
AFFX-LysX-M_at	177.6	A
AFFX-LysX-3_at	19.6	A
AFFX-PheX-5_at	24.6	A
AFFX-PheX-M_at	37.8	A
AFFX-PheX-3_at	43	A
AFFX-ThrX-5_at	35.7	A
AFFX-ThrX-M_at	29.4	A

Total number of rows: 22645

Table truncated, full table size 398 Kbytes.

Supplementary data files not provided