GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM108385

Query DataSets for GSM108385

Status

Public on Jun 27, 2006

Title

M010322_B

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: male
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: BRAFV600E
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma from the left side of the chest.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL97

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	1238.4	P
AFFX-BioB-M_at	2144.9	P
AFFX-BioB-3_at	615.5	P
AFFX-BioC-5_at	2402	P
AFFX-BioC-3_at	2171.3	P
AFFX-BioDn-5_at	2297.8	P
AFFX-BioDn-3_at	17106.5	P
AFFX-CreX-5_at	24370.8	P
AFFX-CreX-3_at	35801.3	P
AFFX-DapX-5_at	94.9	A
AFFX-DapX-M_at	83.2	A
AFFX-DapX-3_at	20.2	A
AFFX-LysX-5_at	119.1	A
AFFX-LysX-M_at	58.9	A
AFFX-LysX-3_at	78.6	A
AFFX-PheX-5_at	8.5	A
AFFX-PheX-M_at	5.7	A
AFFX-PheX-3_at	60.6	A
AFFX-ThrX-5_at	19.8	A
AFFX-ThrX-M_at	27.4	A

Total number of rows: 22645

Table truncated, full table size 398 Kbytes.

Supplementary data files not provided