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Sample GSM108384

Query DataSets for GSM108384

Status

Public on Jun 27, 2006

Title

M000216_B

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: male
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: BRAFV600E
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma of the left groin.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL97

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	854.8	P
AFFX-BioB-M_at	1566	P
AFFX-BioB-3_at	455.8	P
AFFX-BioC-5_at	1993	P
AFFX-BioC-3_at	1483.3	P
AFFX-BioDn-5_at	1708.4	P
AFFX-BioDn-3_at	14309.4	P
AFFX-CreX-5_at	17250.3	P
AFFX-CreX-3_at	27169.7	P
AFFX-DapX-5_at	114	A
AFFX-DapX-M_at	160.6	A
AFFX-DapX-3_at	18.5	A
AFFX-LysX-5_at	85.5	A
AFFX-LysX-M_at	35.6	A
AFFX-LysX-3_at	83.5	A
AFFX-PheX-5_at	16.8	A
AFFX-PheX-M_at	29.5	A
AFFX-PheX-3_at	84.6	A
AFFX-ThrX-5_at	28.7	A
AFFX-ThrX-M_at	113.2	A

Total number of rows: 22645

Table truncated, full table size 399 Kbytes.

Supplementary data files not provided