GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM108381

Query DataSets for GSM108381

Status

Public on Jun 27, 2006

Title

M000921_A

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: female
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: BRAFV600E
NRAS: wt

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma from the epigastrium.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL96

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	301.1	P
AFFX-BioB-M_at	515.4	P
AFFX-BioB-3_at	190.2	P
AFFX-BioC-5_at	767.8	P
AFFX-BioC-3_at	586.4	P
AFFX-BioDn-5_at	575	P
AFFX-BioDn-3_at	5195.7	P
AFFX-CreX-5_at	6807	P
AFFX-CreX-3_at	10828.4	P
AFFX-DapX-5_at	8	A
AFFX-DapX-M_at	52.7	A
AFFX-DapX-3_at	7.2	A
AFFX-LysX-5_at	3.8	A
AFFX-LysX-M_at	53	A
AFFX-LysX-3_at	17.3	A
AFFX-PheX-5_at	3.8	A
AFFX-PheX-M_at	7.2	A
AFFX-PheX-3_at	69.2	A
AFFX-ThrX-5_at	9	A
AFFX-ThrX-M_at	5.1	A

Total number of rows: 22283

Table truncated, full table size 401 Kbytes.

Supplementary data files not provided