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Sample GSM108379

Query DataSets for GSM108379

Status

Public on Jun 27, 2006

Title

M010718_A

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: male
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: wt
NRAS: NRASQ61K

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma from the right thigh.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

[email protected]

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL96

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	345.6	P
AFFX-BioB-M_at	584.6	P
AFFX-BioB-3_at	238.5	P
AFFX-BioC-5_at	842.3	P
AFFX-BioC-3_at	601.5	P
AFFX-BioDn-5_at	746.5	P
AFFX-BioDn-3_at	6385.8	P
AFFX-CreX-5_at	7928.8	P
AFFX-CreX-3_at	9910	P
AFFX-DapX-5_at	35.2	A
AFFX-DapX-M_at	44.9	A
AFFX-DapX-3_at	3.9	A
AFFX-LysX-5_at	19.3	A
AFFX-LysX-M_at	12.5	A
AFFX-LysX-3_at	18.4	A
AFFX-PheX-5_at	2.9	A
AFFX-PheX-M_at	7.7	A
AFFX-PheX-3_at	30.8	A
AFFX-ThrX-5_at	9	A
AFFX-ThrX-M_at	6.9	A

Total number of rows: 22283

Table truncated, full table size 401 Kbytes.

Supplementary data files not provided